Build stable
(inactive) BEL Editor
Tests: Testless build
Duration: 1 minute
Changes: Who: William Hayes <william.s.hayes@gmail.com>
Why: Added Apache 2.0 license
Build unstable
(inactive) BEL Editor
Tests: Testless build
Duration: 1 minute
Changes: Who: William Hayes <william.s.hayes@gmail.com>
Why: Added Apache 2.0 license
Deploy stable
(inactive) BEL Editor
Tests: Testless build
Duration: 1 minute
Changes: No changes
Manual run by Nick Bargnesi
Deploy unstable
(inactive) BEL Editor
Tests: Testless build
Duration: 1 minute
Changes: Who: Nick Bargnesi
Why: Fix statement context view not disposing properly

If the statement context view was closed, the old view part would
continue listening to selection events, resulting in the "widget is
disposed" errors.


Who: Nick Bargnesi
Why: Merge branch "unstable" of github.com:OpenBEL/bel-editor into unstable

Manual run by Nick Bargnesi
Build
(inactive) BEL Framework REST API (experimental)
Tests: Testless build
Duration: 23 seconds
Changes: Who: Nick Bargnesi
Why: Merge branch "experimental" of github.com:nbargnesi/rest-api into experimental
Conflicts:
        java/src/org/openbel/rest/common/AnnotationKeywordCompletion.java
        java/src/org/openbel/rest/common/AnnotationValueCompletion.java
        java/src/org/openbel/rest/common/NamespaceCompletion.java
        java/src/org/openbel/rest/common/NamespaceKeywordCompletion.java
        java/src/org/openbel/rest/common/NamespaceValueCompletion.java

Who: Nick Bargnesi
Why: build fix

Who: Nick Bargnesi
Why: hard-code autocompletion limits to 20

Who: Nick Bargnesi
Why: completion URIs always return 200 w/ a body

Who: Nick Bargnesi
Why: return 204 vice 404 if completion matched nothing
Changes by Nick Bargnesi
Deploy
(inactive) BEL Framework REST API (experimental)
Tests: Testless build
Duration: 3 seconds
Changes: No changes
Manual run by Nick Bargnesi
Test
(inactive) BEL Framework REST API (experimental)
Tests: Testless build
Duration: 8 seconds
Changes: Who: Nick Bargnesi
Why: build fix

Who: Nick Bargnesi
Why: Merge branch "experimental" of github.com:nbargnesi/rest-api into experimental
Conflicts:
        java/src/org/openbel/rest/common/AnnotationKeywordCompletion.java
        java/src/org/openbel/rest/common/AnnotationValueCompletion.java
        java/src/org/openbel/rest/common/NamespaceCompletion.java
        java/src/org/openbel/rest/common/NamespaceKeywordCompletion.java
        java/src/org/openbel/rest/common/NamespaceValueCompletion.java

Who: Nick Bargnesi
Why: hard-code autocompletion limits to 20

Who: Nick Bargnesi
Why: return 204 vice 404 if completion matched nothing

Who: Nick Bargnesi
Why: completion URIs always return 200 w/ a body
Build
(inactive) BEL Framework REST API (master)
Tests: Testless build
Duration: 24 seconds
Changes: Who: Nick Bargnesi
Why: hack a main into translation code
Allows a command-line input for the BEL-to-English translation.
Changes by Nick Bargnesi
Deploy
(inactive) BEL Framework REST API (master)
Tests: Testless build
Duration: 2 seconds
Changes: No changes
Manual run by Nick Bargnesi
Test
(inactive) BEL Framework REST API (master)
Tests: Testless build
Duration: 7 seconds
Changes: Who: Nick Bargnesi
Why: hack a main into translation code
Allows a command-line input for the BEL-to-English translation.
Build
BEL Manager (master)
Tests: Testless build
Duration: 41 seconds
Changes: Who: William Hayes <william.s.hayes@gmail.com>
Why: Bump version: 0.6.29 → 0.6.30
Deploy
BEL Manager (master)
Tests: Testless build
Duration: 51 seconds
Changes: Who: William Hayes <william.s.hayes@gmail.com>
Why: Bump version: 0.6.29 → 0.6.30
Release
BEL Manager (master)
Tests: Testless build
Duration: 5 minutes
Changes: Who: Nick Bargnesi
Why: set RELEASE_TAG_NAME
Manual run by Nick Bargnesi
Build
bel.rb
Tests: 71 of 146 failed
Duration: 30 seconds
Changes: Who: William Hayes <william.s.hayes@gmail.com>
Why: Updated readme
Build Master
BELHop
Tests: Testless build
Duration: 23 seconds
Changes: Who: Nick Bargnesi
Why: Merge branch "next"

Who: Nick Bargnesi
Why: change Travis CI status to master branch
Child of BH-TM-35
Build Next
BELHop
Tests: Testless build
Duration: 17 seconds
Changes: Who: Nick Bargnesi
Why: add Travis CI badge for next branch
Child of BH-TN-123
Test Master
BELHop
Tests: 60 passed
Duration: 28 seconds
Changes: Who: Nick Bargnesi
Why: change Travis CI status to master branch

Who: Nick Bargnesi
Why: Merge branch "next"
Manual run by GitHub
Test Next
BELHop
Tests: 60 passed
Duration: 27 seconds
Changes: Who: Nick Bargnesi
Why: add Travis CI badge for next branch
Manual run by GitHub
Build
bell_parser
Tests: Testless build
Duration: 4 seconds
Changes: Who: William Hayes <william.s.hayes@gmail.com>
Why: Updated readme
Build Language Specifications
Language
Tests: Testless build
Duration: 45 seconds
Changes: No changes
Scheduled
Build
OpenBEL Framework (experimental)
Tests: Testless build
Duration: 1 minute
Changes: Who: Natalie Catlett <natalie_catlett@verizon.net>
Why: Update README.rst
updated link to releases
Full build
OpenBEL Framework (experimental)
Tests: 164 passed
Duration: 1 minute
Changes: Who: William Hayes <william.s.hayes@gmail.com>
Why: Converted to Apache 2.0 License
Nightly build
OpenBEL Framework (experimental)
Tests: Testless build
Duration: 2 minutes
Changes: No changes
Scheduled
Build
OpenBEL Framework (master)
Tests: 162 passed
Duration: 4 minutes
Changes: Who: Nick Bargnesi
Why: add YourKit banner
Changes by Nick Bargnesi
Documentation update
OpenBEL Framework (master)
Tests: Testless build
Duration: 2 minutes
Changes: Who: Nick Bargnesi
Why: add YourKit banner
Full build
OpenBEL Framework (master)
Tests: Testless build
Duration: 4 minutes
Changes: Who: Nick Bargnesi
Why: add YourKit banner
Nightly build
OpenBEL Framework (master)
Tests: Testless build
Duration: 41 seconds
Changes: No changes
Scheduled
Release
OpenBEL Framework (master)
Tests: 161 passed
Duration: 2 minutes
Changes: No changes
Manual run by Anthony Bargnesi
Build
OpenBEL parsers
Tests: Testless build
Duration: 27 seconds
Changes: Who: William Hayes <william.s.hayes@gmail.com>
Why: Updated readme
Build next
OpenBEL Platform
Tests: Testless build
Duration: 9 seconds
Changes: Who: William Hayes <william.s.hayes@gmail.com>
Why: bel2 validation test script

Who: Anthony Bargnesi
Why: added test BNJ files; refs #127

Who: William Hayes <william.s.hayes@gmail.com>
Why: Squashed commit of the following:
commit bdbc2adddb4327567a211739eb5f5dc82e5c42db
Author: William Hayes <william.s.hayes@gmail.com>
Date:   Sun Jan 22 14:44:35 2017 -0500

    Update subprojects

commit 39d9b8ef301230b6d1f5b9176828c717f10cc0a8
Merge: b043b32 00adb22
Author: William Hayes <william.s.hayes@gmail.com>
Date:   Sun Jan 22 14:44:14 2017 -0500

    Merge branch "next" of github.com:OpenBEL/openbel-api into next

    # Conflicts:
    #        subprojects/bel

commit b043b325d7afc618359df4282431045822b7c0c4
Author: William Hayes <william.s.hayes@gmail.com>
Date:   Sun Jan 22 14:42:49 2017 -0500

    Updates to README and Changelog

commit 00adb22fb59eb7dcf0dccc5c47b56ef85ac0d8a9
Author: Anthony Bargnesi <abargnesi@gmail.com>
Date:   Sun Jan 22 14:32:22 2017 -0500

    fix mapping of nanopubs"s experiment ctx values

    corrected multi-valued annotations to be correctly mapped to
    name, value, uri when matching a value in an annotation scheme.

commit 251a86f9fcd6b61ca84d8f852fec77037b29dbc4
Merge: 0a6d235 25f6e1a
Author: William Hayes <william.s.hayes@gmail.com>
Date:   Sun Jan 22 13:34:57 2017 -0500

    Merge branch "next" of github.com:OpenBEL/openbel-api into next

    # Conflicts:
    #        subprojects/bel

commit 0a6d235c0525e84dbb505c614934fe81f54ee5d7
Author: William Hayes <william.s.hayes@gmail.com>
Date:   Sun Jan 22 13:32:28 2017 -0500

    Cleanup and deployment setup

commit 25f6e1a1e02833cb17bda2c395629b3221b15de6
Author: Anthony Bargnesi <abargnesi@gmail.com>
Date:   Sun Jan 22 11:52:50 2017 -0500

    bumped bel; find anno/ns by upper prefix

commit af87a0939848578ff8cce035697e361a438cf6ec
Author: William Hayes <william.s.hayes@gmail.com>
Date:   Sun Jan 22 11:30:08 2017 -0500

    Add deployment tooling

commit 061e5e0ae4634c34f0103b28729397c08216c574
Author: Anthony Bargnesi <abargnesi@gmail.com>
Date:   Sat Jan 21 18:59:00 2017 -0500

    provide semantic validation for each term

    returns a "valid" property for each term in the validation result.

    this will allow clients to easily find the invalid term when the
    validation result is 422.

    in addition the "validation.valid" property will also indicate
    semantic validation result of the complete expression.

commit 9d67047687938bea2a440a06f5cf67539c468e75
Author: Anthony Bargnesi <abargnesi@gmail.com>
Date:   Sat Jan 21 14:55:36 2017 -0500

    http status code responses for /validation

    returns 200 OK when the BEL expression has valid syntax and
    semantics with regards to the configured BEL specification

    returns 400 Bad Request when the BEL expression is not valid
    syntax

    return 422 Unprocessable Entity when the BEL expression is not
    valid semantics with regards to the configured BEL specification

    additionally, the "text/plain" response was dropped, now a JSON
    response is always returned to the client when either 200, 400, or
    429 is sent.

commit 5d42bec53bbe69e7ef0a45c2a205e2de8c05f5fd
Author: Anthony Bargnesi <abargnesi@gmail.com>
Date:   Fri Jan 20 23:36:49 2017 -0500

    nanopubs; default references if not provided

    Motivation

    POST /api/nanopubs and PUT /api/nanopubs require a "references"
    JSON object to be present when annotation and namespace prefixes
    are used.
    - see nanopub schema (app/openbel/api/schemas/nanopub.schema.json)

    If "references" object is not provided then we should default to
    include all available annotation and namespace URI schemes.

    Solution

    Retrieve all available annotation and namespace URI schemes from
    the configured "rdf_store" and make available in the nanopub"s
    references.

commit eaf375c8f60b35e77ded5b06f618a62084f6fe4f
Author: Anthony Bargnesi <abargnesi@gmail.com>
Date:   Fri Jan 20 22:01:03 2017 -0500

    bumped lock file; bel_parser 1.1.1

commit 0b3670590358bb1b7764c0d9465a8d528ec742be
Author: Anthony Bargnesi <abargnesi@gmail.com>
Date:   Fri Jan 20 21:52:59 2017 -0500

    bumped subprojects; post 1.1.0 release

Who: Anthony Bargnesi
Why: bumped Gemfile lock

Who: Anthony Bargnesi
Why: provide semantic validation for each term
returns a "valid" property for each term in the validation result.

this will allow clients to easily find the invalid term when the
validation result is 422.

in addition the "validation.valid" property will also indicate
semantic validation result of the complete expression.

...
Changes by 3 people
Build
OpenBEL Resources
Tests: Testless build
Duration: 2 minutes
Changes: No changes
Scheduled
Build SQLite database
OpenBEL Resources
Tests: Testless build
Duration: 201 minutes
Changes: No changes
Manual run by Anthony Bargnesi
ChEMBL - BEL RDF Namespace
OpenBEL Resources
Tests: Testless build
Duration: < 1 second
Changes: No changes
Manual run by GitHub
Daily deployment
OpenBEL Resources
Tests: Testless build
Duration: 8 seconds
Changes: No changes
Scheduled
Infer
OpenBEL Resources
Tests: Testless build
Duration: 57 minutes
Changes: No changes
Child of OR-BR-1040
Load DB
OpenBEL Resources
Tests: Testless build
Duration: 49 seconds
Changes: No changes
Child of OR-INFER-533
Publish default namespace RDF
OpenBEL Resources
Tests: Testless build
Duration: 1 second
Changes: Who: William Hayes <william.s.hayes@gmail.com>
Why: fixed typos
Publish RDF Resources
OpenBEL Resources
Tests: Testless build
Duration: 1 second
Changes: No changes
Child of OR-PDNR-100
Publish resources
OpenBEL Resources
Tests: Testless build
Duration: 177 minutes
Changes: No changes
Child of OR-REAS-94
Reasoning
OpenBEL Resources
Tests: Testless build
Duration: 184 minutes
Changes: No changes
Child of OR-BR-1040
Resource Search Database 20150611
OpenBEL Resources
Tests: Testless build
Duration: 1 second
Changes: No changes
Manual run by Anthony Bargnesi
Resources Reasoning 20150611
OpenBEL Resources
Tests: Testless build
Duration: 185 minutes
Changes: No changes
Manual run by Anthony Bargnesi
Resource pipeline
Pipelines
Tests: Testless build
Duration: 488 minutes
Changes: Who: Nick Bargnesi
Why: add XBEL v2 example
Changes by Nick Bargnesi